BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003E04LP1|AL425130
(763 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig285 203 5e-52
3x_Contig924 201 2e-51
>3x_Contig285
Length = 777
Score = 203 bits (101), Expect = 5e-52
Identities = 106/109 (97%)
Strand = Plus / Plus
Query: 1 aatcattagattagagttagccgcaccaggtaatcaagttttwagcggaaatcatcattt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 666 aatcattagattagagttagccgcaccaggtaatcaagttttaagcggaaatcatcaatt 725
Query: 61 wtttaatgtcttagtagttgggcatgcggtcttaataattttcttctta 109
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 atttaatgtcttagtagttgggcatgcggtcttaataattttcttctta 774
>3x_Contig924
Length = 2007
Score = 201 bits (100), Expect = 2e-51
Identities = 102/104 (98%)
Strand = Plus / Minus
Query: 660 gattatcttcatttaavaatttagaatttaatcaagataaattttattttgatgaattta 719
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1883 gattatcttcatttaacaatttagaatttaatcaagataaattttattttgatgaattta 1824
Query: 720 atttaaaatataaagaatttaaamctataaattctgttcctgat 763
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1823 atttaaaatataaagaatttaaacctataaattctgttcctgat 1780
Score = 155 bits (77), Expect = 2e-37
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 543 acttcaatacttcattcttcgaagtagcaggtggtggtgaccctgttttataccaacatt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2000 acttcaatacttcattcttcgaagtagcaggtggtggtgaccctgttttataccaacatt 1941
Query: 603 tgttttctatgccattt 619
|||||||||||||||||
Sbjct: 1940 tgttttctatgccattt 1924
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6289
Number of Sequences: 1807
Number of extensions: 6289
Number of successful extensions: 158
Number of sequences better than 1.0e-20: 2
length of query: 763
length of database: 10,358,551
effective HSP length: 16
effective length of query: 747
effective length of database: 10,329,639
effective search space: 7716240333
effective search space used: 7716240333
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)